Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Snrnp40Q6PE01 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm12501-201ENSMUST00000119163 529 ntBASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Mir7677-201ENSMUST00000184226 67 ntBASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm7593-201ENSMUST00000187246 644 ntBASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm37246-201ENSMUST00000192665 835 ntBASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Snrnp40Q6PE01 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm25881-201ENSMUST00000157783 103 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm8194-201ENSMUST00000159783 859 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm43916-201ENSMUST00000205062 967 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm17827-201ENSMUST00000211825 742 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Snrnp40Q6PE01 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms