Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.79□□□□□ -0.36
Casc4Q6P2L7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Gm12502-201ENSMUST00000120197 444 ntBASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Gm7809-201ENSMUST00000153199 742 ntBASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.79□□□□□ -0.36
Casc4Q6P2L7 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.79□□□□□ -0.36
Casc4Q6P2L7 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Casc4Q6P2L7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gm22018-201ENSMUST00000104357 131 ntBASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gm9823-201ENSMUST00000051212 327 ntBASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Casc4Q6P2L7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms