Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Paupar-201ENSMUST00000194826 3482 ntBASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sp140Q6NSQ5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sp140Q6NSQ5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sp140Q6NSQ5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sp140Q6NSQ5 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.77□□□□□ -0.36
Sp140Q6NSQ5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sp140Q6NSQ5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sp140Q6NSQ5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sp140Q6NSQ5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Gm40466-201ENSMUST00000212174 422 ntBASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Sp140Q6NSQ5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Gm4984-201ENSMUST00000115987 360 ntBASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Gm17150-201ENSMUST00000165577 381 ntBASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Gm43818-201ENSMUST00000200605 466 ntBASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Gm24526-201ENSMUST00000082921 158 ntBASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms