Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Cog3-203ENSMUST00000227473 4197 ntBASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tpm4Q6IRU2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tpm4Q6IRU2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Gm12928-201ENSMUST00000117115 573 ntBASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Gm13813-201ENSMUST00000120998 787 ntBASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Gm28693-202ENSMUST00000190758 331 ntBASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tpm4Q6IRU2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms