Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Gm25063-201ENSMUST00000104666 94 ntBASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Gm12030-201ENSMUST00000121917 223 ntBASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smarca2Q6DIC0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Gm5434-202ENSMUST00000222384 1451 ntBASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Gm5434-201ENSMUST00000071825 1451 ntBASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Gm11660-201ENSMUST00000120955 412 ntBASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 AC122350.1-201ENSMUST00000228135 533 ntBASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Smarca2Q6DIC0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Smarca2Q6DIC0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Smarca2Q6DIC0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Smarca2Q6DIC0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Smarca2Q6DIC0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Gm14274-201ENSMUST00000117182 615 ntBASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Gm18201-201ENSMUST00000174735 875 ntBASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 AC136376.2-201ENSMUST00000228819 490 ntBASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarca2Q6DIC0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Gm18706-201ENSMUST00000210053 1066 ntBASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Gm45500-201ENSMUST00000211676 803 ntBASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Gm7959-201ENSMUST00000221823 1078 ntBASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Gm37513-201ENSMUST00000194830 2268 ntBASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Gm38378-201ENSMUST00000195153 2268 ntBASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smarca2Q6DIC0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Mir6407-201ENSMUST00000184510 101 ntBASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Gm18041-201ENSMUST00000218210 618 ntBASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smarca2Q6DIC0 Gm6189-201ENSMUST00000164487 2082 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms