Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Gm13492-201ENSMUST00000119772 665 ntBASIC13.36□□□□□ -0.27
Scube3Q66PY1 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.36□□□□□ -0.27
Scube3Q66PY1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.36□□□□□ -0.27
Scube3Q66PY1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.36□□□□□ -0.27
Scube3Q66PY1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.36□□□□□ -0.27
Scube3Q66PY1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.36□□□□□ -0.27
Scube3Q66PY1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scube3Q66PY1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm13786-201ENSMUST00000122371 333 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Mospd4-201ENSMUST00000180618 576 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm27516-201ENSMUST00000184237 98 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Olfr284-202ENSMUST00000206647 966 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm18944-201ENSMUST00000207672 643 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm18935-201ENSMUST00000212692 664 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm22058-201ENSMUST00000083393 310 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.35□□□□□ -0.27
Scube3Q66PY1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Scube3Q66PY1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms