Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ctr9Q62018 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ctr9Q62018 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ctr9Q62018 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Ctr9Q62018 Gm15703-201ENSMUST00000120250 880 ntBASIC14.89□□□□□ -0.03
Ctr9Q62018 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.89□□□□□ -0.03
Ctr9Q62018 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.89□□□□□ -0.03
Ctr9Q62018 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.89□□□□□ -0.03
Ctr9Q62018 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.89□□□□□ -0.03
Ctr9Q62018 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Gm25043-201ENSMUST00000158604 212 ntBASIC14.89□□□□□ -0.03
Ctr9Q62018 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ctr9Q62018 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.89□□□□□ -0.03
Ctr9Q62018 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Ctr9Q62018 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.89□□□□□ -0.03
Ctr9Q62018 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Ctr9Q62018 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.88□□□□□ -0.03
Ctr9Q62018 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Gm23270-201ENSMUST00000104055 131 ntBASIC14.88□□□□□ -0.03
Ctr9Q62018 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.88□□□□□ -0.03
Ctr9Q62018 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Gm20482-202ENSMUST00000174729 825 ntBASIC14.88□□□□□ -0.03
Ctr9Q62018 Gm27320-201ENSMUST00000184892 109 ntBASIC14.88□□□□□ -0.03
Ctr9Q62018 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.88□□□□□ -0.03
Ctr9Q62018 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.88□□□□□ -0.03
Ctr9Q62018 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctr9Q62018 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ctr9Q62018 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.87□□□□□ -0.03
Ctr9Q62018 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.87□□□□□ -0.03
Ctr9Q62018 Gm13315-201ENSMUST00000120376 991 ntBASIC14.87□□□□□ -0.03
Ctr9Q62018 Gm11597-201ENSMUST00000121423 964 ntBASIC14.87□□□□□ -0.03
Ctr9Q62018 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Gm26083-201ENSMUST00000157904 193 ntBASIC14.87□□□□□ -0.03
Ctr9Q62018 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.87□□□□□ -0.03
Ctr9Q62018 Gm4857-201ENSMUST00000192718 785 ntBASIC14.87□□□□□ -0.03
Ctr9Q62018 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.87□□□□□ -0.03
Ctr9Q62018 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.87□□□□□ -0.03
Ctr9Q62018 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ctr9Q62018 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ctr9Q62018 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Pck2-205ENSMUST00000226352 2784 ntBASIC14.87□□□□□ -0.03
Ctr9Q62018 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.87□□□□□ -0.03
Ctr9Q62018 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctr9Q62018 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.86□□□□□ -0.03
Ctr9Q62018 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ctr9Q62018 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ctr9Q62018 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms