Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox17Q61473 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Sox17Q61473 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Cog3-203ENSMUST00000227473 4197 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Gm23935-201ENSMUST00000102303 57 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Gm24270-201ENSMUST00000102326 57 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Gm16202-201ENSMUST00000117532 544 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox17Q61473 Gm24245-201ENSMUST00000157318 57 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.8□□□□□ -0.52
Sox17Q61473 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox17Q61473 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox17Q61473 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Sox17Q61473 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Sox17Q61473 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox17Q61473 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Gm13616-201ENSMUST00000120600 222 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Gm26308-201ENSMUST00000157768 69 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Gm28760-201ENSMUST00000185995 736 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.79□□□□□ -0.52
Sox17Q61473 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Gm2756-201ENSMUST00000195851 400 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Gm43514-201ENSMUST00000198852 424 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms