Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC15.14■□□□□ 0.01
Mre11Q61216 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.14■□□□□ 0.01
Mre11Q61216 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mre11Q61216 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Mre11Q61216 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Mre11Q61216 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.13■□□□□ 0.01
Mre11Q61216 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Mre11Q61216 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.13■□□□□ 0.01
Mre11Q61216 Gm14760-201ENSMUST00000121831 999 ntBASIC15.13■□□□□ 0.01
Mre11Q61216 Gm44335-201ENSMUST00000196879 141 ntBASIC15.13■□□□□ 0.01
Mre11Q61216 Gm44297-201ENSMUST00000198304 141 ntBASIC15.13■□□□□ 0.01
Mre11Q61216 Gm44346-201ENSMUST00000198851 141 ntBASIC15.13■□□□□ 0.01
Mre11Q61216 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.13■□□□□ 0.01
Mre11Q61216 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC15.13■□□□□ 0.01
Mre11Q61216 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.13■□□□□ 0.01
Mre11Q61216 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC15.13■□□□□ 0.01
Mre11Q61216 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mre11Q61216 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.12■□□□□ 0.01
Mre11Q61216 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Mre11Q61216 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Gm45496-201ENSMUST00000209918 2917 ntBASIC15.12■□□□□ 0.01
Mre11Q61216 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.12■□□□□ 0.01
Mre11Q61216 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Mre11Q61216 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Mre11Q61216 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.12■□□□□ 0.01
Mre11Q61216 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.12■□□□□ 0.01
Mre11Q61216 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.12■□□□□ 0.01
Mre11Q61216 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.12■□□□□ 0.01
Mre11Q61216 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.12■□□□□ 0.01
Mre11Q61216 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC15.12■□□□□ 0.01
Mre11Q61216 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Mre11Q61216 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Mre11Q61216 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mre11Q61216 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Mre11Q61216 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Mre11Q61216 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Mre11Q61216 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC15.11■□□□□ 0.01
Mre11Q61216 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC15.11■□□□□ 0.01
Mre11Q61216 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.11■□□□□ 0.01
Mre11Q61216 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Mre11Q61216 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.11■□□□□ 0.01
Mre11Q61216 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mre11Q61216 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.11■□□□□ 0.01
Mre11Q61216 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms