Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.91□□□□□ -0.34
Slc6a4Q60857 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.9□□□□□ -0.34
Slc6a4Q60857 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Gm24231-201ENSMUST00000104315 133 ntBASIC12.9□□□□□ -0.34
Slc6a4Q60857 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Gm14109-201ENSMUST00000118814 309 ntBASIC12.9□□□□□ -0.34
Slc6a4Q60857 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.9□□□□□ -0.34
Slc6a4Q60857 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.9□□□□□ -0.34
Slc6a4Q60857 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Gm28882-201ENSMUST00000185504 314 ntBASIC12.9□□□□□ -0.34
Slc6a4Q60857 Gm13097-201ENSMUST00000210722 397 ntBASIC12.9□□□□□ -0.34
Slc6a4Q60857 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Slc6a4Q60857 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.9□□□□□ -0.34
Slc6a4Q60857 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Slc6a4Q60857 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a4Q60857 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm15276-201ENSMUST00000145953 498 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm9022-201ENSMUST00000182482 992 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm42937-201ENSMUST00000197360 752 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.89□□□□□ -0.35
Slc6a4Q60857 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.89□□□□□ -0.35
Slc6a4Q60857 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.89□□□□□ -0.35
Slc6a4Q60857 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms