Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.07□□□□□ -0.48
Xrcc1Q60596 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.07□□□□□ -0.48
Xrcc1Q60596 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Gm10434-201ENSMUST00000101158 471 ntBASIC12.07□□□□□ -0.48
Xrcc1Q60596 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Gm15198-201ENSMUST00000117283 177 ntBASIC12.07□□□□□ -0.48
Xrcc1Q60596 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Mir8109-201ENSMUST00000184375 117 ntBASIC12.07□□□□□ -0.48
Xrcc1Q60596 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Xrcc1Q60596 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Gm15370-201ENSMUST00000117158 253 ntBASIC12.06□□□□□ -0.48
Xrcc1Q60596 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.06□□□□□ -0.48
Xrcc1Q60596 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.06□□□□□ -0.48
Xrcc1Q60596 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Xrcc1Q60596 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.05□□□□□ -0.48
Xrcc1Q60596 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Gm15703-201ENSMUST00000120250 880 ntBASIC12.05□□□□□ -0.48
Xrcc1Q60596 Gm11964-201ENSMUST00000120982 444 ntBASIC12.05□□□□□ -0.48
Xrcc1Q60596 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Xrcc1Q60596 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.05□□□□□ -0.48
Xrcc1Q60596 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.05□□□□□ -0.48
Xrcc1Q60596 Gm37489-201ENSMUST00000191883 159 ntBASIC12.05□□□□□ -0.48
Xrcc1Q60596 Gm44405-201ENSMUST00000198952 126 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms