Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps54Q5SPW0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm14726-201ENSMUST00000120623 896 ntBASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm24845-201ENSMUST00000158034 109 ntBASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm17376-201ENSMUST00000166016 84 ntBASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm27243-201ENSMUST00000183964 521 ntBASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm10076-201ENSMUST00000073238 384 ntBASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps54Q5SPW0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm14381-201ENSMUST00000122105 414 ntBASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm13570-201ENSMUST00000140763 309 ntBASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm42937-201ENSMUST00000197360 752 ntBASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm8712-201ENSMUST00000221090 701 ntBASIC15.1■□□□□ 0.01
Vps54Q5SPW0 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps54Q5SPW0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps54Q5SPW0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms