Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.83□□□□□ -0.67
Trav5d-4Q5R1F6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Matn2-203ENSMUST00000226766 3252 ntBASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Gm4984-201ENSMUST00000115987 360 ntBASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Gm32025-201ENSMUST00000217960 307 ntBASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5d-4Q5R1F6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Gm8602-201ENSMUST00000184045 607 ntBASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Gm10268-201ENSMUST00000085340 555 ntBASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms