Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Mir698-201ENSMUST00000102164 109 ntBASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm15653-201ENSMUST00000119247 907 ntBASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm11745-201ENSMUST00000121669 448 ntBASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm37714-201ENSMUST00000194742 342 ntBASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3-3Q5R1C3 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Gm5264-201ENSMUST00000190584 848 ntBASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Gm19184-201ENSMUST00000196798 928 ntBASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms