Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 BC106175-202ENSMUST00000219344 1213 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13aQ5H8C4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Gm44647-201ENSMUST00000207402 428 ntBASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Gm11942-201ENSMUST00000180255 345 ntBASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps13aQ5H8C4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps13aQ5H8C4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps13aQ5H8C4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
Vps13aQ5H8C4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps13aQ5H8C4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Vps13aQ5H8C4 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm11619-201ENSMUST00000117474 237 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm8731-201ENSMUST00000118088 412 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm3329-201ENSMUST00000159873 556 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm43506-201ENSMUST00000200675 753 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm22442-201ENSMUST00000157256 144 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm9136-201ENSMUST00000193368 454 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm29763-201ENSMUST00000205306 616 ntBASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps13aQ5H8C4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Gm28686-201ENSMUST00000187404 609 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms