Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.07□□□□□ -0.32
Trim80Q3V061 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Gm27486-201ENSMUST00000184923 80 ntBASIC13.07□□□□□ -0.32
Trim80Q3V061 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim80Q3V061 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim80Q3V061 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.07□□□□□ -0.32
Trim80Q3V061 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim80Q3V061 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim80Q3V061 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.06□□□□□ -0.32
Trim80Q3V061 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Gm12390-201ENSMUST00000117897 397 ntBASIC13.06□□□□□ -0.32
Trim80Q3V061 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.06□□□□□ -0.32
Trim80Q3V061 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.06□□□□□ -0.32
Trim80Q3V061 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.06□□□□□ -0.32
Trim80Q3V061 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim80Q3V061 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim80Q3V061 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim80Q3V061 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim80Q3V061 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.05□□□□□ -0.32
Trim80Q3V061 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms