Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fam196aQ3USH1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Gm9996-201ENSMUST00000070359 913 ntBASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fam196aQ3USH1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm1848-201ENSMUST00000120711 789 ntBASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm22144-201ENSMUST00000157402 102 ntBASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm8100-201ENSMUST00000182906 988 ntBASIC12.65□□□□□ -0.38
Fam196aQ3USH1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm43184-201ENSMUST00000197247 542 ntBASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm19931-201ENSMUST00000198920 368 ntBASIC12.65□□□□□ -0.38
Fam196aQ3USH1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.65□□□□□ -0.38
Fam196aQ3USH1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fam196aQ3USH1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.64□□□□□ -0.39
Fam196aQ3USH1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms