Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.33□□□□□ -0.12
Gm28047Q3US59 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.33□□□□□ -0.12
Gm28047Q3US59 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.33□□□□□ -0.12
Gm28047Q3US59 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.33□□□□□ -0.12
Gm28047Q3US59 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.33□□□□□ -0.12
Gm28047Q3US59 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Gm43818-201ENSMUST00000200605 466 ntBASIC14.32□□□□□ -0.12
Gm28047Q3US59 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm28047Q3US59 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Gm28047Q3US59 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.31□□□□□ -0.12
Gm28047Q3US59 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Gm28047Q3US59 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm28047Q3US59 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.31□□□□□ -0.12
Gm28047Q3US59 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm28047Q3US59 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.3□□□□□ -0.12
Gm28047Q3US59 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms