Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Mir1943-201ENSMUST00000158276 73 ntBASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gm23699-201ENSMUST00000158835 135 ntBASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gm45118-201ENSMUST00000208928 825 ntBASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gm19994-201ENSMUST00000217086 586 ntBASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Spcs1-203ENSMUST00000226374 592 ntBASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upf3aQ3ULJ3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Gm13611-201ENSMUST00000118269 318 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Gm15711-201ENSMUST00000118889 535 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Gm9996-201ENSMUST00000070359 913 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Upf3aQ3ULJ3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms