Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm11509-201ENSMUST00000117358 325 ntBASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.54□□□□□ -0.56
Spg11Q3UHA3 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Gm13624-201ENSMUST00000120263 462 ntBASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.53□□□□□ -0.56
Spg11Q3UHA3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.52□□□□□ -0.56
Spg11Q3UHA3 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Spg11Q3UHA3 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm12663-201ENSMUST00000118481 958 ntBASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm15566-201ENSMUST00000121130 590 ntBASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm37782-201ENSMUST00000194879 678 ntBASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm37197-201ENSMUST00000195607 401 ntBASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms