Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Brf2Q3UAW9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.87□□□□□ -0.51
Brf2Q3UAW9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm43818-201ENSMUST00000200605 466 ntBASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm24526-201ENSMUST00000082921 158 ntBASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Brf2Q3UAW9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Gm13492-201ENSMUST00000119772 665 ntBASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Gm1335-201ENSMUST00000121653 386 ntBASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Gm16296-201ENSMUST00000159905 325 ntBASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms