Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.11□□□□□ -0.47
Hoxc4Q08624 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxc4Q08624 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxc4Q08624 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.1□□□□□ -0.47
Hoxc4Q08624 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Gm16505-201ENSMUST00000179981 232 ntBASIC12.1□□□□□ -0.47
Hoxc4Q08624 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Gm8913-201ENSMUST00000209491 641 ntBASIC12.1□□□□□ -0.47
Hoxc4Q08624 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxc4Q08624 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.1□□□□□ -0.47
Hoxc4Q08624 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.1□□□□□ -0.47
Hoxc4Q08624 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc4Q08624 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.09□□□□□ -0.47
Hoxc4Q08624 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Gm14028-201ENSMUST00000117434 479 ntBASIC12.09□□□□□ -0.47
Hoxc4Q08624 Gm4909-201ENSMUST00000118749 794 ntBASIC12.09□□□□□ -0.47
Hoxc4Q08624 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.09□□□□□ -0.47
Hoxc4Q08624 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Hoxc4Q08624 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxc4Q08624 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms