Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.94□□□□□ -0.18
Col6a1Q04857 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.94□□□□□ -0.18
Col6a1Q04857 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.94□□□□□ -0.18
Col6a1Q04857 Gm38092-201ENSMUST00000195600 653 ntBASIC13.94□□□□□ -0.18
Col6a1Q04857 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col6a1Q04857 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Gm10179-201ENSMUST00000086233 688 ntBASIC13.94□□□□□ -0.18
Col6a1Q04857 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.94□□□□□ -0.18
Col6a1Q04857 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a1Q04857 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col6a1Q04857 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.93□□□□□ -0.18
Col6a1Q04857 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.93□□□□□ -0.18
Col6a1Q04857 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Gzmn-202ENSMUST00000225535 989 ntBASIC13.93□□□□□ -0.18
Col6a1Q04857 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Ntng1-201ENSMUST00000051253 327 ntBASIC13.93□□□□□ -0.18
Col6a1Q04857 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a1Q04857 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a1Q04857 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.92□□□□□ -0.18
Col6a1Q04857 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.92□□□□□ -0.18
Col6a1Q04857 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col6a1Q04857 Gm14704-201ENSMUST00000120300 874 ntBASIC13.92□□□□□ -0.18
Col6a1Q04857 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Gm6407-201ENSMUST00000176468 549 ntBASIC13.92□□□□□ -0.18
Col6a1Q04857 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.92□□□□□ -0.18
Col6a1Q04857 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a1Q04857 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a1Q04857 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.92□□□□□ -0.18
Col6a1Q04857 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col6a1Q04857 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a1Q04857 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.92□□□□□ -0.18
Col6a1Q04857 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Col6a1Q04857 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Col6a1Q04857 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Col6a1Q04857 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a1Q04857 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a1Q04857 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms