Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp11Q02853 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.26□□□□□ -0.45
Mmp11Q02853 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.26□□□□□ -0.45
Mmp11Q02853 Gm24231-201ENSMUST00000104315 133 ntBASIC12.26□□□□□ -0.45
Mmp11Q02853 Gm12957-201ENSMUST00000117835 377 ntBASIC12.26□□□□□ -0.45
Mmp11Q02853 Rmrp-201ENSMUST00000157463 271 ntBASIC12.26□□□□□ -0.45
Mmp11Q02853 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Gm43438-201ENSMUST00000198133 379 ntBASIC12.26□□□□□ -0.45
Mmp11Q02853 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp11Q02853 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.26□□□□□ -0.45
Mmp11Q02853 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Mmp11Q02853 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.26□□□□□ -0.45
Mmp11Q02853 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp11Q02853 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Mmp11Q02853 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Mmp11Q02853 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.25□□□□□ -0.45
Mmp11Q02853 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.25□□□□□ -0.45
Mmp11Q02853 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Gm8062-201ENSMUST00000139696 444 ntBASIC12.25□□□□□ -0.45
Mmp11Q02853 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Gm8018-201ENSMUST00000173536 789 ntBASIC12.25□□□□□ -0.45
Mmp11Q02853 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.25□□□□□ -0.45
Mmp11Q02853 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.25□□□□□ -0.45
Mmp11Q02853 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp11Q02853 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.25□□□□□ -0.45
Mmp11Q02853 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp11Q02853 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Mmp11Q02853 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp11Q02853 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp11Q02853 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp11Q02853 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms