Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.29□□□□□ -0.12
GabpaQ00422 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GabpaQ00422 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.29□□□□□ -0.12
GabpaQ00422 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GabpaQ00422 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GabpaQ00422 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.28□□□□□ -0.12
GabpaQ00422 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GabpaQ00422 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Gm23200-201ENSMUST00000104379 132 ntBASIC14.28□□□□□ -0.12
GabpaQ00422 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.28□□□□□ -0.12
GabpaQ00422 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.28□□□□□ -0.12
GabpaQ00422 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.28□□□□□ -0.12
GabpaQ00422 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
GabpaQ00422 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.28□□□□□ -0.12
GabpaQ00422 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GabpaQ00422 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
GabpaQ00422 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.28□□□□□ -0.12
GabpaQ00422 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.28□□□□□ -0.12
GabpaQ00422 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.28□□□□□ -0.12
GabpaQ00422 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GabpaQ00422 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
GabpaQ00422 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
GabpaQ00422 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.28□□□□□ -0.12
GabpaQ00422 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GabpaQ00422 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
GabpaQ00422 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
GabpaQ00422 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.27□□□□□ -0.12
GabpaQ00422 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
GabpaQ00422 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.27□□□□□ -0.12
GabpaQ00422 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.27□□□□□ -0.12
GabpaQ00422 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.27□□□□□ -0.12
GabpaQ00422 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GabpaQ00422 Gm24231-201ENSMUST00000104315 133 ntBASIC14.27□□□□□ -0.13
GabpaQ00422 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
GabpaQ00422 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 B9d1os-201ENSMUST00000137010 674 ntBASIC14.27□□□□□ -0.13
GabpaQ00422 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GabpaQ00422 Mir6927-201ENSMUST00000184494 71 ntBASIC14.27□□□□□ -0.13
GabpaQ00422 Gm19994-201ENSMUST00000217086 586 ntBASIC14.27□□□□□ -0.13
GabpaQ00422 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
GabpaQ00422 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.27□□□□□ -0.13
GabpaQ00422 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
GabpaQ00422 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GabpaQ00422 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GabpaQ00422 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GabpaQ00422 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GabpaQ00422 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GabpaQ00422 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GabpaQ00422 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms