Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.81□□□□□ -0.36
Gabpb1Q00420 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Gabpb1Q00420 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Gm13829-201ENSMUST00000119600 138 ntBASIC12.8□□□□□ -0.36
Gabpb1Q00420 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Gm18584-201ENSMUST00000203098 964 ntBASIC12.8□□□□□ -0.36
Gabpb1Q00420 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.8□□□□□ -0.36
Gabpb1Q00420 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.8□□□□□ -0.36
Gabpb1Q00420 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.8□□□□□ -0.36
Gabpb1Q00420 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.8□□□□□ -0.36
Gabpb1Q00420 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gabpb1Q00420 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.8□□□□□ -0.36
Gabpb1Q00420 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Gm11964-201ENSMUST00000120982 444 ntBASIC12.79□□□□□ -0.36
Gabpb1Q00420 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.79□□□□□ -0.36
Gabpb1Q00420 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.79□□□□□ -0.36
Gabpb1Q00420 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gabpb1Q00420 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gabpb1Q00420 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms