Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim43cP86449 Gm5370-201ENSMUST00000187187 574 ntBASIC13.71□□□□□ -0.21
Trim43cP86449 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Gm18304-201ENSMUST00000189162 546 ntBASIC13.71□□□□□ -0.21
Trim43cP86449 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim43cP86449 Gm43133-201ENSMUST00000197472 463 ntBASIC13.71□□□□□ -0.21
Trim43cP86449 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim43cP86449 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim43cP86449 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim43cP86449 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim43cP86449 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.71□□□□□ -0.21
Trim43cP86449 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim43cP86449 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim43cP86449 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim43cP86449 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43cP86449 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43cP86449 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43cP86449 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43cP86449 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43cP86449 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.71□□□□□ -0.22
Trim43cP86449 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43cP86449 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim43cP86449 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.71□□□□□ -0.22
Trim43cP86449 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim43cP86449 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.7□□□□□ -0.22
Trim43cP86449 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43cP86449 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43cP86449 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.7□□□□□ -0.22
Trim43cP86449 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Trim43cP86449 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim43cP86449 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim43cP86449 Gm23119-201ENSMUST00000158610 140 ntBASIC13.7□□□□□ -0.22
Trim43cP86449 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim43cP86449 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.7□□□□□ -0.22
Trim43cP86449 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim43cP86449 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.7□□□□□ -0.22
Trim43cP86449 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim43cP86449 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43cP86449 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Gm13392-201ENSMUST00000117708 150 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Gm12957-201ENSMUST00000117835 377 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Gm12314-201ENSMUST00000118104 538 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trim43cP86449 Gm13875-201ENSMUST00000120162 282 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Gm13342-201ENSMUST00000121055 207 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim43cP86449 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim43cP86449 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Trim43cP86449 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Gm27243-201ENSMUST00000183964 521 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Gm44405-201ENSMUST00000198952 126 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim43cP86449 Gm9823-201ENSMUST00000051212 327 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Gm24136-201ENSMUST00000083374 165 ntBASIC13.69□□□□□ -0.22
Trim43cP86449 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms