Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trim43bP86448 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13□□□□□ -0.33
Trim43bP86448 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trim43bP86448 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43bP86448 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm24644-201ENSMUST00000157114 139 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Snora78-201ENSMUST00000158630 128 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim43bP86448 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm45784-201ENSMUST00000188360 142 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm6091-201ENSMUST00000098307 165 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43bP86448 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim43bP86448 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.99□□□□□ -0.33
Trim43bP86448 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43bP86448 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim43bP86448 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim43bP86448 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim43bP86448 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trim43bP86448 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim43bP86448 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim43bP86448 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Gm11425-201ENSMUST00000119608 498 ntBASIC12.98□□□□□ -0.33
Trim43bP86448 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim43bP86448 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Mir7085-201ENSMUST00000184353 66 ntBASIC12.98□□□□□ -0.33
Trim43bP86448 Gm29127-201ENSMUST00000188304 517 ntBASIC12.98□□□□□ -0.33
Trim43bP86448 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.98□□□□□ -0.33
Trim43bP86448 Gm43438-201ENSMUST00000198133 379 ntBASIC12.98□□□□□ -0.33
Trim43bP86448 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Gm9396-201ENSMUST00000076703 567 ntBASIC12.98□□□□□ -0.33
Trim43bP86448 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim43bP86448 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.98□□□□□ -0.33
Trim43bP86448 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43bP86448 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms