Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.24□□□□□ -0.61
H3f3aP84244 Gm42627-201ENSMUST00000197347 224 ntBASIC11.24□□□□□ -0.61
H3f3aP84244 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.24□□□□□ -0.61
H3f3aP84244 Gm45880-201ENSMUST00000213041 853 ntBASIC11.24□□□□□ -0.61
H3f3aP84244 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.24□□□□□ -0.61
H3f3aP84244 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.24□□□□□ -0.61
H3f3aP84244 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H3f3aP84244 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.24□□□□□ -0.61
H3f3aP84244 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.24□□□□□ -0.61
H3f3aP84244 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
H3f3aP84244 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
H3f3aP84244 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H3f3aP84244 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.24□□□□□ -0.61
H3f3aP84244 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H3f3aP84244 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
H3f3aP84244 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
H3f3aP84244 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
H3f3aP84244 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
H3f3aP84244 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm11793-201ENSMUST00000120433 981 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm13786-201ENSMUST00000122371 333 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm13316-201ENSMUST00000140537 691 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm8018-201ENSMUST00000173536 789 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
H3f3aP84244 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm5904-201ENSMUST00000210286 865 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm26035-201ENSMUST00000083065 308 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Gm22058-201ENSMUST00000083393 310 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
H3f3aP84244 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.23□□□□□ -0.61
H3f3aP84244 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.23□□□□□ -0.61
H3f3aP84244 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
H3f3aP84244 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H3f3aP84244 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
H3f3aP84244 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Gm6023-201ENSMUST00000118217 606 ntBASIC11.22□□□□□ -0.61
H3f3aP84244 Gm14760-201ENSMUST00000121831 999 ntBASIC11.22□□□□□ -0.61
H3f3aP84244 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.22□□□□□ -0.61
H3f3aP84244 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H3f3aP84244 Gm27572-201ENSMUST00000183702 255 ntBASIC11.22□□□□□ -0.61
H3f3aP84244 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms