Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Shox2P70390 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 Gm37935-201ENSMUST00000192012 982 ntBASIC12.43□□□□□ -0.42
Shox2P70390 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 Gm19078-201ENSMUST00000206311 727 ntBASIC12.43□□□□□ -0.42
Shox2P70390 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.43□□□□□ -0.42
Shox2P70390 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.43□□□□□ -0.42
Shox2P70390 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.43□□□□□ -0.42
Shox2P70390 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shox2P70390 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.43□□□□□ -0.42
Shox2P70390 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Shox2P70390 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.42□□□□□ -0.42
Shox2P70390 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Shox2P70390 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Shox2P70390 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.42□□□□□ -0.42
Shox2P70390 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Shox2P70390 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Shox2P70390 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Shox2P70390 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Shox2P70390 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.42□□□□□ -0.42
Shox2P70390 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Gm11524-201ENSMUST00000119349 807 ntBASIC12.42□□□□□ -0.42
Shox2P70390 Gm15703-201ENSMUST00000120250 880 ntBASIC12.42□□□□□ -0.42
Shox2P70390 Gm12260-201ENSMUST00000122447 411 ntBASIC12.42□□□□□ -0.42
Shox2P70390 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.42□□□□□ -0.42
Shox2P70390 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.42□□□□□ -0.42
Shox2P70390 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.42□□□□□ -0.42
Shox2P70390 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.42□□□□□ -0.42
Shox2P70390 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.42□□□□□ -0.42
Shox2P70390 Gm5779-201ENSMUST00000218467 910 ntBASIC12.42□□□□□ -0.42
Shox2P70390 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.42□□□□□ -0.42
Shox2P70390 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.42□□□□□ -0.42
Shox2P70390 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shox2P70390 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Shox2P70390 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.41□□□□□ -0.42
Shox2P70390 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.41□□□□□ -0.42
Shox2P70390 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.41□□□□□ -0.42
Shox2P70390 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.41□□□□□ -0.42
Shox2P70390 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.41□□□□□ -0.42
Shox2P70390 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.41□□□□□ -0.42
Shox2P70390 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shox2P70390 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shox2P70390 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms