Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cux2P70298 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC20.21■□□□□ 0.83
Cux2P70298 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC20.21■□□□□ 0.83
Cux2P70298 Gm13019-201ENSMUST00000120000 276 ntBASIC20.21■□□□□ 0.83
Cux2P70298 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC20.21■□□□□ 0.83
Cux2P70298 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Gm43752-201ENSMUST00000198475 697 ntBASIC20.21■□□□□ 0.83
Cux2P70298 AC113082.1-201ENSMUST00000217324 327 ntBASIC20.21■□□□□ 0.83
Cux2P70298 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Gm37691-201ENSMUST00000192147 2573 ntBASIC20.21■□□□□ 0.83
Cux2P70298 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cux2P70298 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cux2P70298 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cux2P70298 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cux2P70298 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cux2P70298 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC20.2■□□□□ 0.82
Cux2P70298 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cux2P70298 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC20.2■□□□□ 0.82
Cux2P70298 Gm10169-201ENSMUST00000121822 348 ntBASIC20.2■□□□□ 0.82
Cux2P70298 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC20.2■□□□□ 0.82
Cux2P70298 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC20.2■□□□□ 0.82
Cux2P70298 Gm20414-201ENSMUST00000172918 646 ntBASIC20.2■□□□□ 0.82
Cux2P70298 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC20.2■□□□□ 0.82
Cux2P70298 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cux2P70298 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cux2P70298 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Cux2P70298 Gm24791-201ENSMUST00000104284 131 ntBASIC20.19■□□□□ 0.82
Cux2P70298 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC20.19■□□□□ 0.82
Cux2P70298 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Olfr584-201ENSMUST00000098210 964 ntBASIC20.19■□□□□ 0.82
Cux2P70298 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cux2P70298 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cux2P70298 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cux2P70298 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cux2P70298 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC20.19■□□□□ 0.82
Cux2P70298 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC20.19■□□□□ 0.82
Cux2P70298 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC20.19■□□□□ 0.82
Cux2P70298 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cux2P70298 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC20.19■□□□□ 0.82
Cux2P70298 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Cux2P70298 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cux2P70298 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Gm14807-201ENSMUST00000116640 983 ntBASIC20.18■□□□□ 0.82
Cux2P70298 Gm22146-201ENSMUST00000157397 288 ntBASIC20.18■□□□□ 0.82
Cux2P70298 Gm44647-201ENSMUST00000207402 428 ntBASIC20.18■□□□□ 0.82
Cux2P70298 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cux2P70298 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cux2P70298 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC20.17■□□□□ 0.82
Cux2P70298 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cux2P70298 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC20.17■□□□□ 0.82
Cux2P70298 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms