Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.53□□□□□ -0.72
Pdlim4P70271 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pdlim4P70271 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.53□□□□□ -0.72
Pdlim4P70271 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.53□□□□□ -0.72
Pdlim4P70271 AY702102-202ENSMUST00000194651 1173 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Gm8099-201ENSMUST00000200510 742 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pdlim4P70271 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pdlim4P70271 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Pdlim4P70271 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pdlim4P70271 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.53□□□□□ -0.72
Pdlim4P70271 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Pdlim4P70271 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Pdlim4P70271 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pdlim4P70271 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Pdlim4P70271 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
Pdlim4P70271 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Pdlim4P70271 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.52□□□□□ -0.72
Pdlim4P70271 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pdlim4P70271 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pdlim4P70271 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pdlim4P70271 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.52□□□□□ -0.72
Pdlim4P70271 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Pdlim4P70271 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pdlim4P70271 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm12742-201ENSMUST00000117326 410 ntBASIC10.52□□□□□ -0.73
Pdlim4P70271 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm12363-201ENSMUST00000122250 668 ntBASIC10.52□□□□□ -0.73
Pdlim4P70271 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm23363-201ENSMUST00000175024 79 ntBASIC10.52□□□□□ -0.73
Pdlim4P70271 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.52□□□□□ -0.73
Pdlim4P70271 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.52□□□□□ -0.73
Pdlim4P70271 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pdlim4P70271 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Pdlim4P70271 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdlim4P70271 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pdlim4P70271 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pdlim4P70271 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms