Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six5P70178 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six5P70178 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six5P70178 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six5P70178 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six5P70178 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Six5P70178 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Six5P70178 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.82□□□□□ -0.52
Six5P70178 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six5P70178 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.82□□□□□ -0.52
Six5P70178 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six5P70178 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six5P70178 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.81□□□□□ -0.52
Six5P70178 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Six5P70178 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Gm11964-201ENSMUST00000120982 444 ntBASIC11.81□□□□□ -0.52
Six5P70178 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.81□□□□□ -0.52
Six5P70178 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.81□□□□□ -0.52
Six5P70178 Gm6222-202ENSMUST00000182143 629 ntBASIC11.81□□□□□ -0.52
Six5P70178 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.81□□□□□ -0.52
Six5P70178 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.81□□□□□ -0.52
Six5P70178 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Six5P70178 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six5P70178 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Six5P70178 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.8□□□□□ -0.52
Six5P70178 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.8□□□□□ -0.52
Six5P70178 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.8□□□□□ -0.52
Six5P70178 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Gm8018-201ENSMUST00000173536 789 ntBASIC11.8□□□□□ -0.52
Six5P70178 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.8□□□□□ -0.52
Six5P70178 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Six5P70178 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.8□□□□□ -0.52
Six5P70178 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Gm5904-201ENSMUST00000210286 865 ntBASIC11.8□□□□□ -0.52
Six5P70178 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.8□□□□□ -0.52
Six5P70178 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Gm5186-201ENSMUST00000218781 920 ntBASIC11.8□□□□□ -0.52
Six5P70178 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.8□□□□□ -0.52
Six5P70178 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.8□□□□□ -0.52
Six5P70178 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms