Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Map1b-203ENSMUST00000223725 2669 ntBASIC12.5□□□□□ -0.41
Crnkl1P63154 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.5□□□□□ -0.41
Crnkl1P63154 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Crnkl1P63154 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Crnkl1P63154 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm17795-201ENSMUST00000214505 757 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Crnkl1P63154 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.49□□□□□ -0.41
Crnkl1P63154 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.49□□□□□ -0.41
Crnkl1P63154 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Crnkl1P63154 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Crnkl1P63154 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Crnkl1P63154 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.48□□□□□ -0.41
Crnkl1P63154 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Gm6912-201ENSMUST00000117218 544 ntBASIC12.48□□□□□ -0.41
Crnkl1P63154 Gm13385-201ENSMUST00000121089 220 ntBASIC12.48□□□□□ -0.41
Crnkl1P63154 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Crnkl1P63154 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crnkl1P63154 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.48□□□□□ -0.41
Crnkl1P63154 Gm19184-201ENSMUST00000196798 928 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms