Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.39□□□□□ -0.43
Lhx1P63006 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx1P63006 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.39□□□□□ -0.43
Lhx1P63006 Gm26083-201ENSMUST00000157904 193 ntBASIC12.39□□□□□ -0.43
Lhx1P63006 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.39□□□□□ -0.43
Lhx1P63006 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lhx1P63006 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Lhx1P63006 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.39□□□□□ -0.43
Lhx1P63006 Gm3096-201ENSMUST00000185770 364 ntBASIC12.39□□□□□ -0.43
Lhx1P63006 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx1P63006 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lhx1P63006 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.39□□□□□ -0.43
Lhx1P63006 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lhx1P63006 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx1P63006 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lhx1P63006 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.38□□□□□ -0.43
Lhx1P63006 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lhx1P63006 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Gm24231-201ENSMUST00000104315 133 ntBASIC12.38□□□□□ -0.43
Lhx1P63006 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Lhx1P63006 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.38□□□□□ -0.43
Lhx1P63006 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lhx1P63006 Gm27243-201ENSMUST00000183964 521 ntBASIC12.38□□□□□ -0.43
Lhx1P63006 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.38□□□□□ -0.43
Lhx1P63006 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lhx1P63006 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lhx1P63006 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.38□□□□□ -0.43
Lhx1P63006 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lhx1P63006 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx1P63006 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lhx1P63006 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lhx1P63006 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Lhx1P63006 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Lhx1P63006 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.37□□□□□ -0.43
Lhx1P63006 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.37□□□□□ -0.43
Lhx1P63006 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.37□□□□□ -0.43
Lhx1P63006 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.37□□□□□ -0.43
Lhx1P63006 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.37□□□□□ -0.43
Lhx1P63006 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lhx1P63006 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Lhx1P63006 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.37□□□□□ -0.43
Lhx1P63006 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.37□□□□□ -0.43
Lhx1P63006 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.37□□□□□ -0.43
Lhx1P63006 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lhx1P63006 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms