Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Lsm5P62322 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Lsm5P62322 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.48□□□□□ -0.73
Lsm5P62322 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Gm7063-201ENSMUST00000186840 981 ntBASIC10.48□□□□□ -0.73
Lsm5P62322 Gm7774-201ENSMUST00000200064 533 ntBASIC10.48□□□□□ -0.73
Lsm5P62322 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.48□□□□□ -0.73
Lsm5P62322 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.48□□□□□ -0.73
Lsm5P62322 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Lsm5P62322 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.48□□□□□ -0.73
Lsm5P62322 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm5P62322 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Lsm5P62322 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.47□□□□□ -0.73
Lsm5P62322 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.47□□□□□ -0.73
Lsm5P62322 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.47□□□□□ -0.73
Lsm5P62322 Gm27390-201ENSMUST00000184516 176 ntBASIC10.47□□□□□ -0.73
Lsm5P62322 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Lsm5P62322 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Lsm5P62322 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm5P62322 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm5P62322 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.47□□□□□ -0.73
Lsm5P62322 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Lsm5P62322 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.47□□□□□ -0.73
Lsm5P62322 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm5P62322 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm5P62322 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm5P62322 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm5P62322 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.46□□□□□ -0.73
Lsm5P62322 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.46□□□□□ -0.73
Lsm5P62322 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.46□□□□□ -0.73
Lsm5P62322 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Lsm5P62322 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.46□□□□□ -0.73
Lsm5P62322 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm5P62322 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.46□□□□□ -0.73
Lsm5P62322 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms