Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.45□□□□□ -0.58
Lsm3P62311 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.45□□□□□ -0.58
Lsm3P62311 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.45□□□□□ -0.58
Lsm3P62311 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lsm3P62311 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Lsm3P62311 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Lsm3P62311 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Mir3113-201ENSMUST00000175478 76 ntBASIC11.45□□□□□ -0.58
Lsm3P62311 Mir8117-201ENSMUST00000184773 107 ntBASIC11.45□□□□□ -0.58
Lsm3P62311 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.45□□□□□ -0.58
Lsm3P62311 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.45□□□□□ -0.58
Lsm3P62311 Gm5425-201ENSMUST00000214125 459 ntBASIC11.45□□□□□ -0.58
Lsm3P62311 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lsm3P62311 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Lsm3P62311 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Lsm3P62311 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.45□□□□□ -0.58
Lsm3P62311 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lsm3P62311 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lsm3P62311 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.44□□□□□ -0.58
Lsm3P62311 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Lsm3P62311 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Gm27772-201ENSMUST00000184900 187 ntBASIC11.44□□□□□ -0.58
Lsm3P62311 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Gm29608-201ENSMUST00000190444 463 ntBASIC11.44□□□□□ -0.58
Lsm3P62311 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.44□□□□□ -0.58
Lsm3P62311 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.44□□□□□ -0.58
Lsm3P62311 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lsm3P62311 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lsm3P62311 Gm26035-201ENSMUST00000083065 308 ntBASIC11.44□□□□□ -0.58
Lsm3P62311 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.44□□□□□ -0.58
Lsm3P62311 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lsm3P62311 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm3P62311 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lsm3P62311 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm3P62311 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.43□□□□□ -0.58
Lsm3P62311 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm3P62311 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.43□□□□□ -0.58
Lsm3P62311 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms