Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Sssca1P56873 Gm12341-201ENSMUST00000119724 503 ntBASIC10.18□□□□□ -0.78
Sssca1P56873 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.18□□□□□ -0.78
Sssca1P56873 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sssca1P56873 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Sssca1P56873 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.18□□□□□ -0.78
Sssca1P56873 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Sssca1P56873 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.18□□□□□ -0.78
Sssca1P56873 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Sssca1P56873 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Sssca1P56873 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.17□□□□□ -0.78
Sssca1P56873 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.17□□□□□ -0.78
Sssca1P56873 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
Sssca1P56873 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.17□□□□□ -0.78
Sssca1P56873 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.17□□□□□ -0.78
Sssca1P56873 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Sssca1P56873 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sssca1P56873 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sssca1P56873 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sssca1P56873 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.17□□□□□ -0.78
Sssca1P56873 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Sssca1P56873 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.17□□□□□ -0.78
Sssca1P56873 Gm28693-202ENSMUST00000190758 331 ntBASIC10.17□□□□□ -0.78
Sssca1P56873 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Mir339-201ENSMUST00000083659 96 ntBASIC10.17□□□□□ -0.78
Sssca1P56873 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Sssca1P56873 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.17□□□□□ -0.78
Sssca1P56873 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sssca1P56873 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
Sssca1P56873 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.16□□□□□ -0.78
Sssca1P56873 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.16□□□□□ -0.78
Sssca1P56873 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 150.7 ms