Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.67□□□□□ -0.38
SmoP56726 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SmoP56726 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SmoP56726 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SmoP56726 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SmoP56726 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SmoP56726 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SmoP56726 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SmoP56726 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SmoP56726 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SmoP56726 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SmoP56726 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SmoP56726 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SmoP56726 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.66□□□□□ -0.38
SmoP56726 Gm24845-201ENSMUST00000158034 109 ntBASIC12.66□□□□□ -0.38
SmoP56726 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.66□□□□□ -0.38
SmoP56726 Gm4857-201ENSMUST00000192718 785 ntBASIC12.66□□□□□ -0.38
SmoP56726 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.66□□□□□ -0.38
SmoP56726 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.66□□□□□ -0.38
SmoP56726 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SmoP56726 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SmoP56726 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.65□□□□□ -0.38
SmoP56726 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.65□□□□□ -0.38
SmoP56726 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.65□□□□□ -0.38
SmoP56726 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Gm28882-201ENSMUST00000185504 314 ntBASIC12.65□□□□□ -0.38
SmoP56726 Gm3096-201ENSMUST00000185770 364 ntBASIC12.65□□□□□ -0.38
SmoP56726 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.65□□□□□ -0.38
SmoP56726 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.65□□□□□ -0.38
SmoP56726 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.65□□□□□ -0.38
SmoP56726 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SmoP56726 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SmoP56726 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SmoP56726 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.65□□□□□ -0.39
SmoP56726 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.64□□□□□ -0.39
SmoP56726 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SmoP56726 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SmoP56726 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.64□□□□□ -0.39
SmoP56726 Gm14832-201ENSMUST00000121289 322 ntBASIC12.64□□□□□ -0.39
SmoP56726 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.64□□□□□ -0.39
SmoP56726 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.64□□□□□ -0.39
SmoP56726 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.64□□□□□ -0.39
SmoP56726 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SmoP56726 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SmoP56726 Gm8885-201ENSMUST00000189382 598 ntBASIC12.64□□□□□ -0.39
SmoP56726 Gm42937-201ENSMUST00000197360 752 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms