Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.11□□□□□ -0.47
Sox3P53784 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sox3P53784 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Sox3P53784 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sox3P53784 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox3P53784 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Gm2231-201ENSMUST00000125661 612 ntBASIC12.11□□□□□ -0.47
Sox3P53784 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox3P53784 Gm7467-201ENSMUST00000185173 652 ntBASIC12.11□□□□□ -0.47
Sox3P53784 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.11□□□□□ -0.47
Sox3P53784 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sox3P53784 Gm13097-201ENSMUST00000210722 397 ntBASIC12.11□□□□□ -0.47
Sox3P53784 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.11□□□□□ -0.47
Sox3P53784 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.11□□□□□ -0.47
Sox3P53784 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.11□□□□□ -0.47
Sox3P53784 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.11□□□□□ -0.47
Sox3P53784 Gm16372-201ENSMUST00000073088 450 ntBASIC12.11□□□□□ -0.47
Sox3P53784 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox3P53784 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Sox3P53784 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.11□□□□□ -0.47
Sox3P53784 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.1□□□□□ -0.47
Sox3P53784 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm12616-201ENSMUST00000118594 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox3P53784 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox3P53784 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Gm12624-201ENSMUST00000177615 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Gm12621-201ENSMUST00000177760 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Gm12615-201ENSMUST00000177970 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Gm12622-201ENSMUST00000177975 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Gm12627-201ENSMUST00000178412 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Gm12625-201ENSMUST00000179122 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Gm12614-201ENSMUST00000179586 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Gm12613-201ENSMUST00000180323 382 ntBASIC12.1□□□□□ -0.47
Sox3P53784 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox3P53784 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Gm17330-201ENSMUST00000221047 165 ntBASIC12.1□□□□□ -0.47
Sox3P53784 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Sox3P53784 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sox3P53784 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sox3P53784 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox3P53784 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms