Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClgnP52194 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClgnP52194 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ClgnP52194 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClgnP52194 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClgnP52194 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ClgnP52194 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ClgnP52194 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.9□□□□□ -0.34
ClgnP52194 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.9□□□□□ -0.34
ClgnP52194 Gm12291-201ENSMUST00000121627 311 ntBASIC12.9□□□□□ -0.34
ClgnP52194 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.9□□□□□ -0.34
ClgnP52194 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Gm27847-201ENSMUST00000183711 107 ntBASIC12.9□□□□□ -0.34
ClgnP52194 Gm27375-201ENSMUST00000183799 107 ntBASIC12.9□□□□□ -0.34
ClgnP52194 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.9□□□□□ -0.34
ClgnP52194 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.9□□□□□ -0.34
ClgnP52194 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.9□□□□□ -0.34
ClgnP52194 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClgnP52194 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ClgnP52194 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.9□□□□□ -0.34
ClgnP52194 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ClgnP52194 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ClgnP52194 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ClgnP52194 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ClgnP52194 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.89□□□□□ -0.35
ClgnP52194 Gm13123-201ENSMUST00000122173 492 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Gm8810-201ENSMUST00000172895 754 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Gm4271-201ENSMUST00000174444 973 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Gm8652-201ENSMUST00000181363 964 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Gm29649-201ENSMUST00000185649 419 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Gm8099-201ENSMUST00000200510 742 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ClgnP52194 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ClgnP52194 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ClgnP52194 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ClgnP52194 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.89□□□□□ -0.35
ClgnP52194 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ClgnP52194 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ClgnP52194 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ClgnP52194 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.88□□□□□ -0.35
ClgnP52194 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.88□□□□□ -0.35
ClgnP52194 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ClgnP52194 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
ClgnP52194 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.88□□□□□ -0.35
ClgnP52194 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.88□□□□□ -0.35
ClgnP52194 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.88□□□□□ -0.35
ClgnP52194 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClgnP52194 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms