Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Gm24694-201ENSMUST00000180054 110 ntBASIC12.13□□□□□ -0.47
Prox1P48437 Gm5354-201ENSMUST00000182417 973 ntBASIC12.13□□□□□ -0.47
Prox1P48437 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.13□□□□□ -0.47
Prox1P48437 Gm27663-201ENSMUST00000184839 110 ntBASIC12.13□□□□□ -0.47
Prox1P48437 Gm38223-201ENSMUST00000194484 695 ntBASIC12.13□□□□□ -0.47
Prox1P48437 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.13□□□□□ -0.47
Prox1P48437 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.13□□□□□ -0.47
Prox1P48437 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.13□□□□□ -0.47
Prox1P48437 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.13□□□□□ -0.47
Prox1P48437 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.13□□□□□ -0.47
Prox1P48437 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Syt7-204ENSMUST00000223586 1344 ntBASIC12.12□□□□□ -0.47
Prox1P48437 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.12□□□□□ -0.47
Prox1P48437 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Prox1P48437 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.12□□□□□ -0.47
Prox1P48437 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.12□□□□□ -0.47
Prox1P48437 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.12□□□□□ -0.47
Prox1P48437 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Gm28631-201ENSMUST00000190740 334 ntBASIC12.12□□□□□ -0.47
Prox1P48437 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.12□□□□□ -0.47
Prox1P48437 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Prox1P48437 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.12□□□□□ -0.47
Prox1P48437 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.12□□□□□ -0.47
Prox1P48437 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Prox1P48437 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.12□□□□□ -0.47
Prox1P48437 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.12□□□□□ -0.47
Prox1P48437 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.12□□□□□ -0.47
Prox1P48437 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.12□□□□□ -0.47
Prox1P48437 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prox1P48437 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prox1P48437 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Prox1P48437 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.11□□□□□ -0.47
Prox1P48437 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prox1P48437 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.11□□□□□ -0.47
Prox1P48437 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.11□□□□□ -0.47
Prox1P48437 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms