Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.23□□□□□ -0.29
Rfx2P48379 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rfx2P48379 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.23□□□□□ -0.29
Rfx2P48379 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rfx2P48379 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.23□□□□□ -0.29
Rfx2P48379 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.23□□□□□ -0.29
Rfx2P48379 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Rfx2P48379 Matn2-203ENSMUST00000226766 3252 ntBASIC13.23□□□□□ -0.29
Rfx2P48379 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rfx2P48379 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Rfx2P48379 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Rfx2P48379 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfx2P48379 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rfx2P48379 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.22□□□□□ -0.29
Rfx2P48379 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rfx2P48379 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rfx2P48379 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Rfx2P48379 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.22□□□□□ -0.29
Rfx2P48379 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Gm26956-201ENSMUST00000182176 986 ntBASIC13.22□□□□□ -0.29
Rfx2P48379 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.22□□□□□ -0.29
Rfx2P48379 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.22□□□□□ -0.29
Rfx2P48379 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.22□□□□□ -0.29
Rfx2P48379 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.22□□□□□ -0.29
Rfx2P48379 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.22□□□□□ -0.29
Rfx2P48379 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.22□□□□□ -0.29
Rfx2P48379 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Rfx2P48379 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.22□□□□□ -0.29
Rfx2P48379 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.22□□□□□ -0.29
Rfx2P48379 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.22□□□□□ -0.29
Rfx2P48379 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfx2P48379 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.22□□□□□ -0.29
Rfx2P48379 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rfx2P48379 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.21□□□□□ -0.29
Rfx2P48379 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.21□□□□□ -0.29
Rfx2P48379 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rfx2P48379 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Rfx2P48379 Rubie-203ENSMUST00000227803 2430 ntBASIC13.21□□□□□ -0.29
Rfx2P48379 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rfx2P48379 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rfx2P48379 Gm13492-201ENSMUST00000119772 665 ntBASIC13.21□□□□□ -0.29
Rfx2P48379 Gm14704-201ENSMUST00000120300 874 ntBASIC13.21□□□□□ -0.29
Rfx2P48379 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.21□□□□□ -0.29
Rfx2P48379 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.21□□□□□ -0.29
Rfx2P48379 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rfx2P48379 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.21□□□□□ -0.29
Rfx2P48379 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfx2P48379 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms