Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13□□□□□ -0.33
Msh2P43247 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13□□□□□ -0.33
Msh2P43247 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Msh2P43247 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Msh2P43247 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Gm8810-201ENSMUST00000172895 754 ntBASIC13□□□□□ -0.33
Msh2P43247 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13□□□□□ -0.33
Msh2P43247 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Gm37748-201ENSMUST00000194379 1140 ntBASIC13□□□□□ -0.33
Msh2P43247 Gm19184-201ENSMUST00000196798 928 ntBASIC13□□□□□ -0.33
Msh2P43247 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13□□□□□ -0.33
Msh2P43247 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13□□□□□ -0.33
Msh2P43247 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13□□□□□ -0.33
Msh2P43247 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Gm18983-201ENSMUST00000222884 2729 ntBASIC13□□□□□ -0.33
Msh2P43247 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Msh2P43247 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Msh2P43247 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.99□□□□□ -0.33
Msh2P43247 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Msh2P43247 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Msh2P43247 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.99□□□□□ -0.33
Msh2P43247 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Msh2P43247 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Gm16202-201ENSMUST00000117532 544 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Gm8213-201ENSMUST00000118191 441 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Gm10156-201ENSMUST00000122364 462 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.99□□□□□ -0.33
Msh2P43247 Gm17150-201ENSMUST00000165577 381 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Gm9630-201ENSMUST00000178304 885 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Gm24196-201ENSMUST00000179161 110 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Gm27847-201ENSMUST00000183711 107 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Gm27375-201ENSMUST00000183799 107 ntBASIC12.99□□□□□ -0.33
Msh2P43247 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.99□□□□□ -0.33
Msh2P43247 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh2P43247 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.98□□□□□ -0.33
Msh2P43247 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.98□□□□□ -0.33
Msh2P43247 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Msh2P43247 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Msh2P43247 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.98□□□□□ -0.33
Msh2P43247 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Gm4984-201ENSMUST00000115987 360 ntBASIC12.98□□□□□ -0.33
Msh2P43247 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Gm18187-201ENSMUST00000196476 984 ntBASIC12.98□□□□□ -0.33
Msh2P43247 Gm35960-201ENSMUST00000202712 767 ntBASIC12.98□□□□□ -0.33
Msh2P43247 Gm44069-201ENSMUST00000204898 506 ntBASIC12.98□□□□□ -0.33
Msh2P43247 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.98□□□□□ -0.33
Msh2P43247 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.98□□□□□ -0.33
Msh2P43247 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms