Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.37□□□□□ -0.75
Timp3P39876 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Gm7809-201ENSMUST00000153199 742 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.37□□□□□ -0.75
Timp3P39876 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.37□□□□□ -0.75
Timp3P39876 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Timp3P39876 Gm27516-201ENSMUST00000184237 98 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Mir8109-201ENSMUST00000184375 117 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.37□□□□□ -0.75
Timp3P39876 Gm37489-201ENSMUST00000191883 159 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Gm7046-201ENSMUST00000221351 977 ntBASIC10.37□□□□□ -0.75
Timp3P39876 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Timp3P39876 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Timp3P39876 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.37□□□□□ -0.75
Timp3P39876 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.37□□□□□ -0.75
Timp3P39876 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.37□□□□□ -0.75
Timp3P39876 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Timp3P39876 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Timp3P39876 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.36□□□□□ -0.75
Timp3P39876 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Timp3P39876 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Timp3P39876 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Timp3P39876 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Timp3P39876 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Timp3P39876 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Timp3P39876 Gm10434-201ENSMUST00000101158 471 ntBASIC10.36□□□□□ -0.75
Timp3P39876 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Gm13297-201ENSMUST00000120205 934 ntBASIC10.36□□□□□ -0.75
Timp3P39876 Gm12363-201ENSMUST00000122250 668 ntBASIC10.36□□□□□ -0.75
Timp3P39876 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.36□□□□□ -0.75
Timp3P39876 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.36□□□□□ -0.75
Timp3P39876 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.36□□□□□ -0.75
Timp3P39876 Gm6222-202ENSMUST00000182143 629 ntBASIC10.36□□□□□ -0.75
Timp3P39876 Mir7221-201ENSMUST00000184009 72 ntBASIC10.36□□□□□ -0.75
Timp3P39876 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.36□□□□□ -0.75
Timp3P39876 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.36□□□□□ -0.75
Timp3P39876 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.36□□□□□ -0.75
Timp3P39876 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.36□□□□□ -0.75
Timp3P39876 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Timp3P39876 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Timp3P39876 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms