Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LdlrP35951 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.56□□□□□ -0.4
LdlrP35951 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Gm5687-201ENSMUST00000118252 640 ntBASIC12.56□□□□□ -0.4
LdlrP35951 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.56□□□□□ -0.4
LdlrP35951 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Gm27572-201ENSMUST00000183702 255 ntBASIC12.56□□□□□ -0.4
LdlrP35951 Gm5370-201ENSMUST00000187187 574 ntBASIC12.56□□□□□ -0.4
LdlrP35951 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.56□□□□□ -0.4
LdlrP35951 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.56□□□□□ -0.4
LdlrP35951 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.56□□□□□ -0.4
LdlrP35951 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LdlrP35951 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
LdlrP35951 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
LdlrP35951 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.56□□□□□ -0.4
LdlrP35951 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.56□□□□□ -0.4
LdlrP35951 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.56□□□□□ -0.4
LdlrP35951 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.56□□□□□ -0.4
LdlrP35951 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LdlrP35951 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
LdlrP35951 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
LdlrP35951 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
LdlrP35951 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.55□□□□□ -0.4
LdlrP35951 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Gm24644-201ENSMUST00000157114 139 ntBASIC12.55□□□□□ -0.4
LdlrP35951 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.55□□□□□ -0.4
LdlrP35951 Gm19184-201ENSMUST00000196798 928 ntBASIC12.55□□□□□ -0.4
LdlrP35951 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Gm18054-201ENSMUST00000207539 555 ntBASIC12.55□□□□□ -0.4
LdlrP35951 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.55□□□□□ -0.4
LdlrP35951 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.55□□□□□ -0.4
LdlrP35951 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Itm2b-204ENSMUST00000228637 783 ntBASIC12.55□□□□□ -0.4
LdlrP35951 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LdlrP35951 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LdlrP35951 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.55□□□□□ -0.4
LdlrP35951 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LdlrP35951 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms