Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rfc1P35601 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.3□□□□□ -0.28
Rfc1P35601 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.3□□□□□ -0.28
Rfc1P35601 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.3□□□□□ -0.28
Rfc1P35601 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Rfc1P35601 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.3□□□□□ -0.28
Rfc1P35601 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.3□□□□□ -0.28
Rfc1P35601 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rfc1P35601 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfc1P35601 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rfc1P35601 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.29□□□□□ -0.28
Rfc1P35601 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.29□□□□□ -0.28
Rfc1P35601 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfc1P35601 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Rfc1P35601 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm14719-201ENSMUST00000121891 340 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.29□□□□□ -0.28
Rfc1P35601 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.29□□□□□ -0.28
Rfc1P35601 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rfc1P35601 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.29□□□□□ -0.28
Rfc1P35601 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfc1P35601 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm20445-201ENSMUST00000061905 565 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfc1P35601 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.29□□□□□ -0.28
Rfc1P35601 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.29□□□□□ -0.28
Rfc1P35601 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfc1P35601 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfc1P35601 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.29□□□□□ -0.28
Rfc1P35601 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Rfc1P35601 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.28□□□□□ -0.28
Rfc1P35601 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Mir7023-201ENSMUST00000185093 64 ntBASIC13.28□□□□□ -0.28
Rfc1P35601 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.28□□□□□ -0.28
Rfc1P35601 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.28□□□□□ -0.28
Rfc1P35601 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.28□□□□□ -0.28
Rfc1P35601 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Gm24447-201ENSMUST00000083977 338 ntBASIC13.28□□□□□ -0.28
Rfc1P35601 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms