Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.96□□□□□ -0.82
Rom1P32958 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Gm27525-201ENSMUST00000184465 107 ntBASIC9.96□□□□□ -0.82
Rom1P32958 Gm8000-201ENSMUST00000188378 592 ntBASIC9.96□□□□□ -0.82
Rom1P32958 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.96□□□□□ -0.82
Rom1P32958 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.96□□□□□ -0.82
Rom1P32958 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.96□□□□□ -0.82
Rom1P32958 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Mir339-201ENSMUST00000083659 96 ntBASIC9.96□□□□□ -0.82
Rom1P32958 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.96□□□□□ -0.82
Rom1P32958 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.96□□□□□ -0.82
Rom1P32958 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Rom1P32958 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Rom1P32958 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.96□□□□□ -0.82
Rom1P32958 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Rom1P32958 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.96□□□□□ -0.82
Rom1P32958 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rom1P32958 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Rom1P32958 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.95□□□□□ -0.82
Rom1P32958 Gm14760-201ENSMUST00000121831 999 ntBASIC9.95□□□□□ -0.82
Rom1P32958 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Rom1P32958 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.95□□□□□ -0.82
Rom1P32958 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Rom1P32958 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Rom1P32958 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.95□□□□□ -0.82
Rom1P32958 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Rom1P32958 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rom1P32958 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.94□□□□□ -0.82
Rom1P32958 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rom1P32958 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms