Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.87□□□□□ -0.67
Slc6a1P31648 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Slc6a1P31648 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Slc6a1P31648 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.86□□□□□ -0.67
Slc6a1P31648 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.86□□□□□ -0.67
Slc6a1P31648 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.86□□□□□ -0.67
Slc6a1P31648 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Slc6a1P31648 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.86□□□□□ -0.67
Slc6a1P31648 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Slc6a1P31648 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc6a1P31648 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm12859-201ENSMUST00000117834 427 ntBASIC10.85□□□□□ -0.67
Slc6a1P31648 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm21854-201ENSMUST00000179901 471 ntBASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm42599-201ENSMUST00000201308 469 ntBASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.85□□□□□ -0.67
Slc6a1P31648 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm15823-201ENSMUST00000064305 670 ntBASIC10.85□□□□□ -0.67
Slc6a1P31648 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc6a1P31648 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc6a1P31648 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.85□□□□□ -0.67
Slc6a1P31648 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a1P31648 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms