Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Gm15240-201ENSMUST00000118156 720 ntBASIC11.61□□□□□ -0.55
Nedd8P29595 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.61□□□□□ -0.55
Nedd8P29595 Gm28659-201ENSMUST00000188013 759 ntBASIC11.61□□□□□ -0.55
Nedd8P29595 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.61□□□□□ -0.55
Nedd8P29595 Gm18195-201ENSMUST00000207604 706 ntBASIC11.61□□□□□ -0.55
Nedd8P29595 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.61□□□□□ -0.55
Nedd8P29595 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nedd8P29595 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Nedd8P29595 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.61□□□□□ -0.55
Nedd8P29595 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nedd8P29595 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nedd8P29595 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Nedd8P29595 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nedd8P29595 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nedd8P29595 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.6□□□□□ -0.55
Nedd8P29595 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.6□□□□□ -0.55
Nedd8P29595 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.6□□□□□ -0.55
Nedd8P29595 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nedd8P29595 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.6□□□□□ -0.55
Nedd8P29595 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.6□□□□□ -0.55
Nedd8P29595 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nedd8P29595 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nedd8P29595 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nedd8P29595 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nedd8P29595 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nedd8P29595 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nedd8P29595 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.59□□□□□ -0.55
Nedd8P29595 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nedd8P29595 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.59□□□□□ -0.55
Nedd8P29595 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.59□□□□□ -0.55
Nedd8P29595 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.59□□□□□ -0.55
Nedd8P29595 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.59□□□□□ -0.55
Nedd8P29595 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.59□□□□□ -0.55
Nedd8P29595 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Gm29608-201ENSMUST00000190444 463 ntBASIC11.59□□□□□ -0.55
Nedd8P29595 Gm42599-201ENSMUST00000201308 469 ntBASIC11.59□□□□□ -0.55
Nedd8P29595 Gm2651-201ENSMUST00000203560 838 ntBASIC11.59□□□□□ -0.55
Nedd8P29595 Gm18905-201ENSMUST00000205454 928 ntBASIC11.59□□□□□ -0.55
Nedd8P29595 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nedd8P29595 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms